Back

Brain Connectivity

SAGE Publications

Preprints posted in the last 7 days, ranked by how well they match Brain Connectivity's content profile, based on 25 papers previously published here. The average preprint has a 0.02% match score for this journal, so anything above that is already an above-average fit.

1
Comparing different neuroimaging modalities for quantification of the cholinergic system in Parkinson's disease

d'Angremont, E.; Marschall, T. M.; Renken, R. J.; Sommer, I. E.

2026-07-17 neurology 10.64898/2026.07.15.26357522 medRxiv
Top 0.2%
1.5%
Show abstract

Introduction Parkinson's disease (PD) is a multifactorial disorder, affecting multiple neurotransmitter systems, including the cholinergic system. Cholinergic denervation is heterogeneous across patients and difficult to predict based on clinical presentation. In this study, we assessed the sensitivity of structural MRI (sMRI) and functional MRI (fMRI) to cholinergic degeneration related to PD and to cognitive functioning in PD. We compared our results to results from previously reported [18F]Fluoroethoxybenzovesamicol ([18F]FEOBV) PET imaging, which is considered the gold standard for cholinergic imaging. Methods 34 PD patients and 10 healthy controls underwent structural T1-weighted MRI. A subset of 14 patients and 9 controls also underwent resting-state fMRI. We extracted the bilateral volumes of the nucleus basalis of Meynert (NBM) from the sMRI images. Functional connectivity (FC) from the NBM to the cortex (NBM-FC) was determined using fMRI data. Principal component analysis (PCA) was applied to reduce the dimensionality of the NBM-FC images. We assessed performances for NBM-FC in distinguishing patients from controls using stepwise logistic regression. Similarly, NBM volume was used using logistic regression. Furthermore, the relation between these measures and cognitive function in several domains was investigated with (stepwise) linear regression. Leave-one-out cross validation (LOOCV) and bootstrapping was performed to assess robustness of the results. Results NBM-FC was well able to discriminate patients from controls with an AUC of 0.84 (95% CI: 0.62-1). NBM volume showed lower performance, but was still better than chance: AUC: 0.75 (95% CI: 0.57-0.93). Significant correlations were found between 1) cognition in the attentional domain and NBM-FC (r=0.63; p=.015) and 2) global cognition and NBM volume (r=0.55, p=.001). These results were inferior to those previously reported using [18F]FEOBV tracer uptake (see Chapter 6). Bootstrapping revealed that NBM volume of only the left hemisphere was stably related to PD diagnosis and global cognition in PD patients. We found that a lower NBM-FC in specific brain areas, including the fusiform gyrus, supramarginal gyrus and dorsolateral prefrontal cortex, was related to PD diagnosis. Bootstrapping revealed no stable NBM-FC pattern related to attention. Conclusion Although MRI results were slightly inferior to [18F]FEOBV PET data, MRI may provide a cheaper and more widely available alternative for cholinergic imaging. We recommend testing the utility of MRI as predictor and monitor of cholinergic treatment effect in a longitudinal study.

2
Brain Structural and Resting-state Functional Network Changes Following Expiratory Musculature Targeted Resistance Training in Healthy Young Adults: A Pilot Study

Krishnamurthy, R.; Schultz, D.; Wang, Y.; Barlow, S. M.; Dietsch, A. M.

2026-07-15 neuroscience 10.64898/2026.07.09.737407 medRxiv
Top 0.5%
0.5%
Show abstract

Multimodal imaging approaches that combine structural and functional neuroimaging provide a robust framework for examining neuroplastic adaptations that may not be captured by any single modality. The present study investigated the effects of a four-week expiratory muscle strength training (EMST) program on structural and resting-state functional connectivity in healthy young adults. Five healthy young adult males (aged 19-35 years) completed a standard four-week EMST protocol and underwent pre- and post-training imaging assessments. Structural neuroimaging included T1-weighted and diffusion-weighted MRI, which were analyzed using voxel-based morphometry, surface-based morphometry, and white-matter structural connectivity. Functional neuroimaging consisted of resting-state fMRI to assess training-related changes in functional architecture, network connectivity, and global network measures. Structural MRI analyses revealed no significant changes in gray or white matter volume, cortical morphology, or white-matter structural connectivity following EMST (all FWE- or FDR-corrected p > .05). In contrast, resting-state fMRI demonstrated a significant increase in whole-brain functional connectivity (FDR-corrected p = .036), accompanied by greater network integration, reflected in increased local efficiency and transitivity and reduced modularity. Network-level analyses showed enhanced within- and between-network connectivity in sensorimotor and cognitive circuits. Our findings demonstrate robust functional reorganization following EMST, despite the absence of detectable macrostructural or large-scale white-matter connectivity changes, at least within the timescale and sample characteristics of the current study. These results reflect early-stage neuroplasticity, both globally and within the networks underlying speech and swallowing control and suggest that functional reorganization occurs early in training and likely precedes longer-term structural modifications in these networks.

3
Validity and Reliability of the Novel Indonesian Instrument for Aphasia Diagnosis (IDEA)

Prawiroharjo, P.; Fakhri, A.; Gabrielle, A.; Martalia, V.; Rahmayani, S. A.; Wijaya, V. G.

2026-07-19 neurology 10.64898/2026.07.17.26358303 medRxiv
Top 0.7%
0.4%
Show abstract

Aphasia diagnosis in Indonesia remains challenging due to limited culturally and linguistically appropriate instruments. Widely used tools such as the Boston Diagnostic Aphasia Examination (BDAE) and Western Aphasia Battery (WAB) are not adapted to the Indonesian context, while Tes Afasia untuk Diagnosis, Informasi, dan Rehabilitasi (TADIR) provides screening but lacks diagnostic accuracy. To address this gap, we developed the Instrumen Diagnosis dan Evaluasi Afasia (IDEA) for native Indonesian speakers and evaluated its validity, reliability, and normative cutoff values in cognitively healthy Indonesian adults. Eighty-three cognitively normal adults (screened using MoCA-Ina) with no history of neurological disease were assessed using IDEA, which evaluates six language domains. Items were adapted from existing tools and reviewed by experts. Content validity, internal consistency (Cronbachs alpha), and construct validity (Exploratory Factor Analysis) were analyzed using SPSS v25. A total of 83 participants were included (median age = 55.81 years, 54% secondary education). IDEA demonstrated good feasibility, with an average completion time of 45-60 minutes depending on participant engagement. Content validity was established by unanimous expert consensus. Construct validity showed meritorious sampling adequacy (KMO = .872) and significant sphericity (Bartletts test {chi}^2 (15) = 278.523, p<.001), supporting factor analysis. Internal consistency showed good reliability across six domains (Cronbachs = 0.896). IDEA is a valid and reliable tool for assessing aphasia in Indonesian natives. It is a culturally appropriate assessment tool which offers structured, domain-based evaluation and supports differential diagnosis of both classical and progressive aphasia syndromes. Keywords: Aphasia, Language Assessment, Indonesian, IDEA, Validity

4
Portable Ultra-Low Field MRI Deep-Learning Algorithms for White Matter Lesion Segmentation Improve Accuracy and Reflect Clinical Disability in Multiple Sclerosis

Thommana, A. A.; Donnay, C. A.; Norato, G.; Gaitan, M. I.; Griffanti, L.; Nair, G.; Reich, D. S.; Okar, S. V.

2026-07-17 neurology 10.64898/2026.07.15.26357954 medRxiv
Top 1%
0.2%
Show abstract

White matter lesion (WML) identification, assessment, and characterization using magnetic resonance imaging (MRI) are fundamental for diagnosis and monitoring of multiple sclerosis (MS). Portable ultra-low field (pULF) MRI at 64 millitesla (mT) has been shown to visualize WML with at least one dimension greater than 4 mm. An automated WML segmentation tool catered to pULF-MRI can provide standardized and accurate quantitative measurements of WML volume. In this study, we sought to investigate and compare the accuracy of machine-learning (ML) and deep-learning (DL) pULF MRI segmentation tools. Same-day paired pULF (64mT) and high-field (HF, 3T) MRI scans from 84 adults with MS or suspected-MS (mean age {+/-} SD: 48 {+/-} 13, 62 females) included T2-FLAIR and T1w images. Reference WML segmentations were manually annotated on pULF T2-FLAIR for all scans, with WML confirmed with registered HF T2-FLAIR. HF reference WML segmentations were created. Four automated segmentation methods were applied to pULF scans: Method for Inter-Modal Segmentation Analysis (MIMoSA), an ML algorithm trained on HF WML masks; WMH-SynthSeg, a convolutional neural network model with flexible segmentation capabilities across field strengths and resolution; nnU-Net, a DL algorithm trained on pULF reference WML masks; and Pseudo-Label Assisted nnU-Net (PLAn), a DL algorithm pre-trained on HF reference WML masks and refined with 64mT reference WML masks. Two models were trained with nnU-Net, one using T2-FLAIR images only (nnU-Net-FL) and one using T1w and T2-FLAIR images (nnU-Net-FL/T1). The same was done with PLAn, creating PLAn-FL and PLAn-FL/T1. The six automated WML segmentation outputs were compared to the manual segmentations to determine Dice Similarity Coefficient (DSC) scores. Associations of WML volume estimates with clinical measures were investigated. DSC scores with pULF reference WML masks from PLAn-FL (DSC mean {+/-} SD: 0.50 {+/-} 0.24) outperformed MIMoSA (0.24 {+/-} 0.20, p < 0.0001), WMH-SynthSeg (0.30 {+/-} 0.18, p < 0.0001), nnU-Net-FL (0.41 {+/-} 0.24, p < 0.0001), and nnU-Net-FL/T1 (0.41 {+/-} 0.26, p = 0.0004). Worse Expanded Disability Status Scale (EDSS) and Scripps Neurologic Rating Scale (SNRS) scores were correlated with higher WML volumes in the pULF and HF reference masks. They were also correlated with WML volumes derived from WHM-SynthSeg, nnU-Net-FL, nnU-Net-FL/T1, PLAn-FL, and PLAn-FL/T1, but not MIMoSA. After adjusting for age, WHM-SynthSeg, nnU-Net FL, nnU-Net-FL/T1, PLAn-FL, and PLAn-FL/T1 had significant associations with EDSS and SNRS scores. nnU-Net and PLAn performed best in segmenting WML on pULF-MRI at 64 mT, providing accurate quantitative estimates of WML burden. Moreover, WML volumes estimated by these algorithms were associated with clinical measures of disability, underscoring their utility for reflecting clinical and radiological disease severity. Given pULF-MRI's mobility and lower cost, these findings highlight its relevance in clinical trials, particularly in involving more participants who face logistical constraints and barriers.

5
The Prognostic Value of Genetic Architectures in Cognitive Decline

Espero, M.

2026-07-15 neurology 10.64898/2026.07.13.26357971 medRxiv
Top 1%
0.2%
Show abstract

Background & Methods: The multifaceted physical nature of heritable cognitive impairment in dementia presents significant challenges for traditional linear frameworks attempting to model synergistic risk. While various loci are identified as contributing to neurocognitive disparities, the emergent phenotypic expression and associated predictive value relative to standard clinical baselines require further investigation. To facilitate dimensional reduction of complex genetic data into identifiable phenotypes, Generalized Low Rank Modeling (GLRM) and K-means clustering are applied to participant data from the Alzheimer's Disease Neuroimaging Initiative (ADNI). The utility of these derived archetypes and clusters is assessed, stratifying variance for Mini-Mental State Examination (MMSE) performance. Utilizing generalized additive modeling (GAM) and partial eta squared (p2) effect size, the derived genetic features are compared with other predictors including age, educational attainment, gender, and raw, genetic variant carriage dimensions. Results & Conclusion: In accordance with the hypothesized empirical regularity, age and education persist as primary predictors of MMSE performance. The unsupervised machine learning pipeline successfully identified a composite genetic cluster that emerged as an influential predictor in terms of relative magnitude (p2). Centroid analysis of the GLRM subspace indicated that a particular sub-population (Cluster 2) - defined by a substantial weighting on the EPHA1 target - demonstrated a statistically significant association with MMSE scores, relative to cluster 3. These results suggest that data-driven genetic feature engineering provides an interpretable basis for inference regarding variance in global cognition. By discovering multivariate genetic architecture, this modeling approach captures complexity often missed by individual clinical variable modeling. Such findings implicate the utility of interpretable machine learning for translational dementia research and predictive clinical stratification.

6
Electrophysiological features of signals recorded from white matter

Jafri, R.; Ortega, F. A.; Manivannan, P.; Jourahmad, Z.; Devara, D.; Mattar, L.; Krishna, S.; Liu, G.; Chamarthi, S.; Goldman, A. M.; Lin, L.; Krishnan, V.; Maheshwari, A.; Banks, G. P.; Hasen, M.; Paulo, D.; Watrous, A. J.; Hayden, B. Y.; Yau, J.; Sheth, S. A.; Provenza, N. R.; Murphy, N.; Heilbronner, S. R.; Bartoli, E.

2026-07-15 neuroscience 10.64898/2026.07.11.737939 medRxiv
Top 1%
0.2%
Show abstract

Intracranial neurophysiology studies have typically ignored signals from electrodes located in white matter (WM), assuming that their information content is artifactual or related to nearby gray matter (GM). Here, we tested the electrophysiological and functional features of signals recorded from different WM locations. Signals were recorded from 19 patients undergoing intracranial monitoring for drug-resistant epilepsy by means of stereo-electroencephalography (sEEG). Each sEEG electrode was classified into WM or GM based on the surrounding tissue. We obtained recordings from a total of 1,717 sEEG electrode contacts, 36% in WM, while the patients were in awake resting state (5 minutes). For each sEEG electrode, we employed a model-based spectral decomposition to separate periodic and aperiodic components, and we computed signal complexity metrics. For a subset of participants, we computed WM structural information from diffusion-weighted magnetic resonance imaging and we evaluated functional signals during a cognitive control task. Our results show that signals recorded from WM have different spectral features and higher complexity than GM. Complexity correlates positively with fractional anisotropy, and modulations related to behavior during the task were detected in WM. Overall, this indicates that WM signals carry information that may reflect signal propagation across WM fiber tracts.

7
Hyperbolic Brain Modelling and Neurocognitive Decline Analysis for Disease Detection

Mukhopadhyay, A.; Halder, K.; Neogy, R.

2026-07-15 neuroscience 10.64898/2026.07.09.737540 medRxiv
Top 1%
0.1%
Show abstract

Mapping hierarchical brain networks within traditional Euclidean space causes significant structural distortion, undermining neuroimaging diagnostic frameworks. While hyperbolic models like the Poincare ball preserve these nested topologies, they demand heavy computational overhead due to intricate Mobius operations and curved geodesics. This paper introduces a highly efficient non-Euclidean framework for analyzing neurocognitive decline utilizing the Beltrami-Klein ball model. By projecting hyperbolic geodesics as Euclidean straight lines, this approach converts complex distance calculations into simple dot products, radically reducing processing demands. We validated our methodology against state-of-the-art Poincare and Lorentz baselines using datasets for Schizophrenia, Parkinsons Disease, and Alzheimers Disease. The Klein-based framework demonstrates superior performance, delivering both higher diagnostic precision and accelerated processing velocities across all three neurocognitive disorders.

8
Toward multimodal MRI biomarkers of PTSD: functional and structural connectivity signatures in WTC responders

Invernizzi, A.; Folloni, D.; Rechtman, E.; Santiago-Michels, S.; Lucchini, R. G.; Luft, B. J.; Clouston, S.; Tang, C. Y.; Horton, M.

2026-07-15 occupational and environmental health 10.64898/2026.07.13.26357932 medRxiv
Top 1%
0.1%
Show abstract

Background: Post-traumatic stress disorder (PTSD) remains highly prevalent affecting ~23% of World Trade Center (WTC) responders more than two decades after 9/11. While MRI studies have identified neural differences associated with PTSD, these findings have not translated into improved treatment. We introduce a novel multimodal MRI approach, DAta-driven Network Connectivity Estimate (DANCE), integrating structural and functional magnetic resonance imaging (MRI) to better capture PTSD mechanisms and inform biomarkers. Methods: In 96 WTC responders , including 45 with current WTC-related PTSD and 51 without PTSD. We applied graph theory to resting-state functional MRI to identify functional hubs via eigenvector centrality and identified divergence between groups using partial least squares discriminant analysis (PLS-DA). From diffusion MRI, we reconstructed five anatomical tracts (i.e., streamlines) in the temporal lobes. Using DANCE, we quantified the differential distribution of streamlines of the reconstructed tracts connecting the functional hubs. We then tested whether WTC exposure duration moderated associations between PTSD and DANCE indices. Results: Responders with PTSD showed altered centrality in nine functional hubs (AUC=0.75 (0.651-0.847)) including bilateral anterior inferior temporal gyrus, right superior parietal lobule, right anterior parahippocampal gyrus, right anterior/posterior superior temporal gyrus (STG), right caudate nucleus, left amygdala and brainstem. Connectivity differences emerged in four tracts: hippocampus, parahippocampus, inferior and superior temporal gyri (STG). DANCE differed in the inferior fronto-occipital fasciculus (IFOF), medial (IFLmed) and lateral (IFLlat) components of the inferior longitudinal fasciculus and in the middle longitudinal fascicle (MdLF). WTC exposure duration significantly moderated the association between PTSD and DANCE values in the IFLmed, right posterior STG (p= 0.035). Conclusion: Our novel DANCE approach revealed converging functional and anatomical connectivity alterations uniquely associated with PTSD in WTC responders and offers compelling evidence for distinct neurobiological signatures of the disorder. These findings significantly advance our understanding of PTSD pathophysiology and highlight potential biomarkers for diagnosis and targeted intervention.

9
What Do Persistent Misclassifications Tell Us About Alzheimer's Disease Detection using Structural MRI?

Stark, D.; Shin, H.; Muenster, N.; Federmann, L.; Ritter, K.; Alzheimer's Disease Neuroimaging Initiative,

2026-07-20 neurology 10.64898/2026.07.17.26358326 medRxiv
Top 2%
0.1%
Show abstract

Deep learning classifiers applied to structural MRI (sMRI) have achieved high performance in detecting Alzheimer's Disease (AD), yet systematic investigation of their failure modes remains limited. In this study, we trained two deep learning architectures to classify AD from cognitively normal (CN) participants using sMRI data from the ADNI dataset, and examined whether misclassifications persist across models and training configurations. We identified a subgroup of subjects who were persistently misclassified across 100 model instances, and found that these subjects exhibited a markedly different atrophy subtype distribution compared to correctly classified AD cases, with substantial enrichment of hippocampal-sparing and minimal atrophy subtypes. To disentangle whether persistent false negatives (FN) reflect earlier disease stage or atypically presenting disease, we analyzed longitudinal follow-up scans and tested whether model predictions changed as neurodegeneration progressed. A change in prediction (from FN to true positive (TP)) was observed in only a subgroup of subjects and required intervals of up to five years, suggesting that persistent misclassification may not always be explained by disease staging alone. Although the sample size is small, these findings underscore the importance of accounting for disease heterogeneity in the development and evaluation of clinical AI models for AD detection.

10
Brain Network Excitability Predicts Clinical Severity in Multiple Sclerosis

Amato, L. G.; Angiolelli, M.; Demuru, M.; Troisi Lopez, E.; Quarantelli, M.; Granata, C.; Depannemaecker, D.; Jirsa, V.; Bonavita, S.; Mazzoni, A.; Sorrentino, P.

2026-07-16 neurology 10.64898/2026.07.10.26357763 medRxiv
Top 2%
0.1%
Show abstract

Comprehensive biomarkers of multiple sclerosis (MS) capable of simultaneously diagnosing the condition, capturing symptom severity and predicting treatment efficacy remain elusive. Although several studies have highlighted the pivotal role played by demyelinating lesions in determining MS structural pathology, their relationship with symptom severity is limited. Here, we combined personalized computational brain modeling with magnetoencephalography (MEG) recordings from 17 MS patients and 20 healthy controls (CTR) to derive personalized brain network excitability parameters, which we tested as MS biomarkers. Personalized parameters discriminated between CTR and MS participants with high accuracy, also classifying between progressing and remitting MS patients. Notably, they also predicted MS clinical scales across multiple domains. In all clinical tasks, personalized parameters consistently outperformed standard clinical measures and total lesion loads. Together, these results highlight the potential of personalized brain modelling in deriving integrative MS biomarkers, capable of simultaneously identifying the condition, classifying MS subtypes and predicting symptom severity. d brain modelling in deriving integrative MS biomarkers, capable of simultaneously identifying the condition, classifying between MS subtypes and predicting the severity of symptomatology.

11
Initial Technical and Clinical Validation of Mobile Pupillometry with Virtual Reality: A Digital Biomarker for Screening Cognitive Function and Impairment

Brendler, A.; Fietz, J.; Bauer, A.; Pfahl, D.; Higgins, S.; Vidovic, E.; Brueckl, T.; BeCOME Working Group, ; Memory Clinic Working Group, ; Hupe, K.; Knop, M.; Spoormaker, V. I.

2026-07-17 neurology 10.64898/2026.07.15.26358187 medRxiv
Top 2%
0.1%
Show abstract

Cognitive impairment is a prevalent symptom extending from physiological ageing to disease. It commonly manifests itself in initial memory problems, progressing and co-occurring in more severe conditions such as Mild Cognitive Impairment, Alzheimer's Disease and Major Depressive Disorder. However, current non-invasive screening assessments either lack biological information or are invasive and restricted to specialized centers with complex and cost-intensive set-ups. Here, we conducted an initial validation of mobile pupillometry with Virtual Reality (VR) under experimental conditions as a digital biomarker for cognitive impairment by testing required biomarker-specific properties. For this purpose, we first assessed its construct validity by testing healthy participants (n=43) on an n-back task in VR while pupil size was measured. Mixed effects models revealed that similar to lab-based eye-tracking systems, pupil size increased in a sensible and distinguishable fashion as a function of working memory load. Second, to test the signal's reliability, the same participants were tested on the identical set-up two to three months after their first visit. We observed that the pupil response profile was highly stable over this period. Third, for its clinical validity, we examined patients (n=89) from three different cohorts with varying degrees of cognitive impairment and compared them to healthy control participants (n=81). Mixed-effects models indicated that pupil size was reduced as a function of cognitive impairment levels at higher cognitive load and that this effect was stronger pronounced with increasing age. In conclusion, we provide initial evidence for mobile pupillometry being a sensitive, reliable and clinically valid digital biomarker for cognitive functioning and impairment, which offers desirable properties due to its quick, automatized and location-independent set-up. Keywords: digital biomarker, mobile pupillometry, Virtual Reality, cognition, , Major Depressive Disorder, Mild Cognitive Impairment, Alzheimer's Disease

12
How Do Nurses Make Clinical Decisions Via Remote Reviews: A Convergent Mixed-Methods Study

Zhang, Y.; Sutherland, S.; GREENWAY, K.; Stayt, L.

2026-07-17 nursing 10.64898/2026.07.15.26357946 medRxiv
Top 2%
0.0%
Show abstract

Abstract Background: Remote clinical reviews have become an integral component of contemporary nursing practice across community and acute care settings. Nurses increasingly make autonomous clinical decisions using telephone, video, and online/digital systems, often with limited sensory information and under conditions of uncertainty. However, empirical understanding of how nurses make clinical decisions via remote reviews remains limited. Aim: To explore and understand how registered nurses (RNs) make clinical decisions about patient care via remote reviews. Methods: A convergent mixed-methods design was employed. Quantitative data (analytic quantitative sample N=53) were collected using validated questionnaires that measured decision-making processes, physician-nurse collaboration, decision-making stress, and perceived decision-making ability. Qualitative data (N=23) were generated through semi-structured interviews. Data collection took place between October 2024 and April 2025. Quantitative data were analysed using descriptive statistics, correlation, and multiple regression. Qualitative data were analysed using framework analysis. Integration was achieved through pillar-building and theory-driven synthesis and illustrated by joint display tables. Results: Most nurses demonstrated a flexible decision-making style, integrating analytical and intuitive reasoning. Both analytical and intuitive processes were positively associated with perceived decision-making ability. Physician-nurse collaboration emerged as a strong predictor of decision-making confidence, while decision-related stress was not a significant predictor. Qualitative findings identified three themes: characteristics of remote review; making adaptive decisions shaped by both internal and external constraints and enablers; and external influencing factors. The integrated findings informed a theory-informed ICE framework to illustrate how nurses make clinical decisions via remote reviews. Conclusion: Remote clinical decision-making is a dynamic cognitive-environmental process rather than a purely individual cognitive act. The ICE framework conceptualises this interaction, extending existing decision-making theories to digitally mediated care. Impact: Understanding remote decision-making supports training design, clinical governance, and the development of Artificial Intelligence-enhanced decision-support tools grounded in ecological bounded rationality. Patient or Public Contribution: Patient and public representatives contributed to stakeholder discussions that informed the development of the interview topic guide and the theoretical model. Patients or members of the public were not involved in recruitment, data collection, analysis, interpretation of findings, or preparation of the manuscript. Keywords: clinical decision-making, remote reviews, telehealth, nursing, mixed methods, ecological bounded rationality

13
Association between serum CEA levels and ctDNA-detected Epidermal Growth Factor Receptor mutations in lung adenocarcinoma

Roy, S.; Soroar, M. K. I.; Ara, H.; Nur, S. A.; Akanda, R. A.; Saha, S.; Alam, M. M.

2026-07-17 oncology 10.64898/2026.07.14.26358115 medRxiv
Top 2%
0.0%
Show abstract

Background with objective: Detecting EGFR mutations is critical for treating lung adenocarcinoma with highly effective targeted therapies. However, standard genetic testing is expensive, complex, and often unavailable in resource-limited settings like Bangladesh. Because elevated serum CEA has been linked to these genetic alterations, it could serve as an accessible screening tool. This study aims to evaluate the association between serum CEA levels and EGFR mutation status to determine if routine CEA testing can reliably predict these mutations and guide treatment. Methodology: In this cross-sectional analytical study, we recruited 58 patients with histologically confirmed treatment naive lung adenocarcinoma. The presence of EGFR mutations in the ctDNA was determined via ARMS (Amplification Refractory Mutation System) PCR. Patient data was statistically analyzed to assess the diagnostic correlation between serum CEA levels and the presence of EGFR mutations. Result: The overall EGFR mutation rate was 43.1% with exon 19 deletion (48%) and exon 21 mutations (44%) were the predominant types. Median serum CEA levels were significantly higher in patients with EGFR mutations compared to wild-type cases (14.6 ng/ml vs 2.8 ng/ml, p<0.001). A multivariate analysis revealed a 14% increased likelihood of an EGFR mutation for 1 ng/ml rise in serum CEA. Furthermore, serum CEA showed strong diagnostic accuracy for ctDNA samples at a 6.39 ng/ml cut-off (AUC 0.82, sensitivity 68.0%, specificity 84.8%). Conclusion: Serum CEA is a valuable, cost-effective, and non-invasive biomarker demonstrating significantly higher levels and strong diagnostic accuracy in EGFR-mutated lung adenocarcinoma compared to wild-type cases.

14
Trait Resilience Modulates the Association Between Cortisol and Aperiodic Neural Dynamics

Lee, K. F. A.; Asharaf, S. T.; Liang, L.; Lee, T. M. C.

2026-07-15 neuroscience 10.64898/2026.07.09.737399 medRxiv
Top 2%
0.0%
Show abstract

Cortisol, our stress hormone, exerts widespread influence on neural activity. However, its influence on the aperiodic component of the electroencephalography power spectrum remains to be investigated. Given individual differences in the capacity to cope with stress and adversity, it also remains unclear whether trait resilience moderates this relationship. Hence, the present study examined whether individual differences in trait resilience moderates the association between resting cortisol and aperiodic activity. Participants (N=145) completed various self-report questionnaires (e.g., trait resilience). Electroencephalography was recorded over a 20-minute baseline period, followed by salivary cortisol collection. The results revealed a significant moderating effect of trait resilience in the occipital scalp region. Specifically, higher cortisol concentration was associated with flatter 1/f slopes amongst individuals with low trait resilience, whereas this association was reversed amongst those with high trait resilience. Overall, our findings highlight the role of individual differences in trait resilience in shaping hypothalamic-pituitary-adrenal axis-related neural dynamics.

15
Machine learning and data-driven models for predicting post-stroke dysphagia: a systematic review and meta-analysis

Mohammadi Yazdi, S.; Motevaselian, M.; Khatami, S.; Radfar, N.; jourahmad, z.; Perez, H. A.

2026-07-17 neurology 10.64898/2026.07.15.26358113 medRxiv
Top 2%
0.0%
Show abstract

Background: Post-stroke dysphagia (PSD) contributes to aspiration, pneumonia, malnutrition, prolonged hospitalization and mortality. We evaluated the discrimination, validity and readiness of machine learning and data-driven prediction models for PSD-related outcomes. Methods: Following a prospectively registered protocol (PROSPERO CRD420261419259), we searched PubMed/MEDLINE, Embase, Web of Science Core Collection, CINAHL and CENTRAL from inception through June 7, 2026. Eligible studies developed or validated multivariable prediction models for PSD-related outcomes in adults with stroke. We used PROBAST and PROBAST+AI to assess risk of bias and applicability and TRIPOD+AI to evaluate reporting. Area under the curve (AUC) estimates were pooled on the logit scale with random-effects models. Results: Twenty-four studies were included and ten contributed to meta-analysis. Four studies predicting early or incident PSD yielded a pooled AUC of 0.94 (95% CI 0.60-0.99; I2 = 95.6%). Pooled AUCs were 0.84 (95% CI 0.71-0.92) for aspiration or penetration-aspiration and 0.89 (95% CI 0.24-1.00) for severe dysphagia. The exploratory analysis of all ten risk-prediction models produced an AUC of 0.90 (95% CI 0.80-0.95), but heterogeneity was substantial (I2 = 90.3%) and the prediction interval was 0.51-0.99. Every study had high risk of bias because of analysis-domain concerns; calibration and external validation were uncommon. Conclusions: Reported discrimination was often high, but the evidence does not establish reliable performance in care. Independent validation, calibration, complete model reporting and clinical-impact studies are needed before these models guide post-stroke swallowing care. Keywords: Post-stroke dysphagia; Stroke; Deglutition disorders; Machine learning; Clinical prediction model; Area under the curve; Meta-analysis

16
Microvascular Thrombosis and Acute Kidney Injury in COVID-19: A Systematic Review and Quantitative Analysis

Duarte, C. A.; Uscocovich, V. S. M.; Misael, I.; Duarte, P. D. A. C.; Sestito, E. B.; Da SIlva, P. N.

2026-07-17 nephrology 10.64898/2026.07.14.26357748 medRxiv
Top 2%
0.0%
Show abstract

Abstract Objective: To synthesize the available evidence on the association between SARS-CoV-2-related microvascular thrombosis and acute kidney injury (AKI), with emphasis on renal outcomes, mortality, and renal replacement therapy requirements. Methods: This systematic review followed the PRISMA 2020 statement and was prospectively registered in PROSPERO (CRD420251132701). PubMed/MEDLINE, Scopus, and Embase were searched for systematic reviews, including meta-analyses, and umbrella reviews investigating the association between SARS-CoV-2-related microvascular thrombosis and acute kidney injury. Two reviewers independently performed study selection, data extraction, and methodological quality assessment using AMSTAR-2 and ROBIS. Evidence was synthesized through a structured narrative synthesis supported by quantitative data extracted from the included reviews. Results: Six evidence syntheses evaluating kidney involvement, thrombotic events, and microvascular mechanisms in COVID-19 were included. AKI incidence was 9.2% (95%CI 4.6-13.9) among hospitalized patients and 32.6% (95%CI 8.5-56.6) among critically ill patients. In children with multisystem inflammatory syndrome associated with SARS-CoV-2, AKI incidence was 20% (95%CI 14-28). Microvascular or thrombotic events were associated with adverse renal outcomes (OR 2.14; 95%CI 1.32-3.48). AKI was associated with increased mortality (OR 4.68; 95%CI 1.06-20.70) and greater likelihood of renal replacement therapy requirement (OR 2.87; 95%CI 1.45-5.68). The certainty of evidence ranged from moderate to high for the principal outcomes. Conclusion: Current evidence supports an important association between microvascular thrombotic injury and COVID-19-associated AKI. These findings reinforce the relevance of endothelial dysfunction and thromboinflammatory pathways in kidney involvement during COVID-19 and highlight the need for early renal monitoring, risk stratification, and kidney-protective strategies in high-risk patients. Keywords: COVID-19; Acute Kidney Injury; Microvascular Thrombosis; SARS-CoV-2; Renal Replacement Therapy; Systematic Review

17
Photobiomodulation promotes wound healing and functional improvement following lumbar decompression surgery: a double-blinded, placebo-controlled study

Rivera, J.; Zhou, Y.; Sak, L.; Pudewa, F.; Lee, J.; Yamamoto, M. T.; Yoo, H.; Lum, M.; Zhang, M.; Patel, A.; Vandenberghe, L. E.; Fenn, S. K.; Wang, Y.; Bailey, B.; Holley, S. M.; Vivas, A. C.; Holly, L. T.; Lu, D. C.

2026-07-17 surgery 10.64898/2026.07.15.26357882 medRxiv
Top 2%
0.0%
Show abstract

Objective: Photobiomodulation therapy has emerged as a promising modality to facilitate scar healing and pain management in dermatology and plastic surgery. However, its role in postoperative care following spine surgeries remains understudied. This double-blinded, placebo-controlled study aimed to investigate the effects of photobiomodulation in patients with chronic lower back pain undergoing lumbar decompression, with postoperative wound healing as the primary outcome and pain reduction and functional recovery as secondary outcomes. Methods: Patients were randomized to receive either active photobiomodulation braces (N=13) or placebo braces (N=12). Follow-up assessments were performed at 2, 4, 6, 8, and 12 weeks postoperatively. Outcomes included wound healing (Stony Brook Scar Evaluation Scale), back and leg pain (Visual Analog Scale), quality of life (EuroQol 5D), and functional status (Oswestry Disability Index). Results: Compared to the placebo group, the photobiomodulation treatment group had a 4.12-fold cumulative improvement in final scar scores, with significant between-group differences at postoperative weeks 6, 8, and 12 (p = 0.0062, 0.010, 0.042). Among patients with severe preoperative disability, treatment resulted in a 1.89-fold faster improvement in back pain (p=0.025) and a 1.80-fold faster improvement in ODI scores (p=0.025); and superior treatment effect on wound healing were again observed at weeks 6, 8, and 12. Among patients with poor initial scars, treatment led to a significantly better scar outcome than placebo at week 6 and a 1.94-fold faster EQ5D improvement (p=0.052), with significant gains observed as early as two weeks after surgery. There were no adverse events associated with photobiomodulation treatment. Conclusions: Photobiomodulation significantly promoted postoperative wound healing following lumbar decompression surgery, with therapeutic benefits preserved even in patients with poor baseline scar scores and functional impairment. This indicates that the efficacy of photobiomodulation is not limited by the initial scar condition or disability, supporting its broad clinical applicability. Additionally, patients with severe preoperative disability experienced greater benefits from photobiomodulation than placebo, including faster reduction in back pain and more rapid improvement in functional capacity, highlighting its role in postoperative pain management and rehabilitation. These therapeutic effects are likely mediated by photobiomodulation-induced reduction of inflammation and enhancement of tissue repair. Together, this study suggests that photobiomodulation can be a promising adjunct therapy to facilitate postoperative recovery in patients undergoing spine surgery.

18
PARIS (Pneumonia: Acute Respiratory Infection +/- Sepsis): a prospective single-centre observational cohort study of hospitalised patients with pneumonia

Nasser, S. T.; Piercy, C. R.; Falinska, A.; O'Sullivan, D. M.; Devonshire, A.; Martinez-Estrada, F.; Huggett, J.; Creagh-Brown, B. C.

2026-07-17 respiratory medicine 10.64898/2026.07.15.26357955 medRxiv
Top 2%
0.0%
Show abstract

Introduction Hospitalised community-acquired pneumonia (CAP) is heterogeneous in aetiology, severity, and outcome. Phenotyping and endotyping approaches offer potential to stratify patients biologically and guide targeted therapy, but require well-characterised cohorts with linked biosamples. We describe the PARIS (Pneumonia: Acute Respiratory Infection +/- Sepsis) study: a prospective observational cohort of hospitalised patients with pneumonia, designed to characterise functional outcomes and to provide a biobank for translational immunological research. Methods Adults admitted with CAP to a single NHS district general hospital were enrolled within 24 hours of admission between December 2020 and March 2022. Clinical, functional, and physiological data were collected at enrolment, hospital discharge, and 6-8 week follow-up. Serial blood samples were collected for flow cytometry, transcriptomics, pathogen DNA detection, and plasma biobanking. Results Forty-seven patients were enrolled (15 without and 32 with sepsis [SOFA >=2] at enrolment); 87% met sepsis criteria by 24 hours post enrolment. Most patients (30/47, 64%) were managed as COVID-19, microbiologically confirmed in 27. Mean age was 57 years (SD 16), 70% were male, and baseline comorbidity burden was low. Severity was moderate (median NEWS2 4 at enrolment, rising to 6 by 24 hours post enrolment; p<0.001). Mortality was 4/47 (8.5%), with 44/47 (94%) alive at hospital discharge. Median length of stay was 8 days (IQR 5.5-11). Translational samples were collected from the majority: fresh flow cytometry (44/47, 94%), transcriptomics from the sepsis subgroup (31/32, 97%), pathogen DNA sampling (35 samples received across study timepoints; see Table 5), and stored plasma (29/47, 62%). The primary outcome of functional decline (Barthel score decrease >=1.85) occurred in only 1/29 patients with paired assessments (3.4%). Persistent CRP elevation (>3 mg/L) at 6-8 week follow-up was present in 16/31 (52%) survivors with available data. Conclusions The PARIS cohort provides a well-characterised clinical platform and linked biobank to support translational studies of pneumonia and sepsis. The low rate of functional decline reflects the younger, lower-comorbidity, COVID-predominant population recruited. Primary protocol endpoints were not achieved owing to pandemic-related disruption. Data and samples underpin a programme of linked translational studies.

19
Rest-Activity Rhythm Variability Across Clinical Episodes of Bipolar Disorder: Standalone Biomarker or Statistical Artifact?

Konicarova, C.-A.; Schneider, J.; Spaniel, F.; Kolenic, M.; Alda, M.; Bakstein, E.

2026-07-17 psychiatry and clinical psychology 10.64898/2026.07.15.26358139 medRxiv
Top 2%
0.0%
Show abstract

Background: Actigraphy-derived rest-activity rhythm (RAR) features are widely used to characterize clinical states in bipolar disorder (BD). Both mean levels and temporal variability of these features have been associated with mood episodes; however, variability measures are often statistically coupled with the mean, particularly in skewed distributions. This raises a question as to whether variability reflects a separate characteristic of the data or whether the observed association arises from statistical properties of the data. Objective: In this study, we aim to determine whether temporal variability of actigraphy-derived RAR features provides standalone information on mood episodes in BD beyond mean activity levels after accounting for mean-variance dependence. Methods: We analyzed actigraphy data from a subset of 72 participants with BD drawn from a larger longitudinal study, extracting 22 daily RAR features aggregated weekly as sample mean (MEAN) and within-week temporal variability computed as sample standard deviation (VAR). Variance-stabilizing transformations (Box-Cox or Yeo-Johnson) were applied to the entire study cohort to reduce mean-variance dependence. Associations with mood episodes and remission (mania: n=34; depression: n=58 annotated participants) were evaluated using generalized linear mixed-effects models with a logistic link function, including univariate (MEAN or VAR) and multivariate (MEAN+VAR) specifications, assessed by likelihood-based metrics and the area under the receiver operating characteristic curve (AUC). Results: Transformations reduced mean-absolute correlations from 0.43 to below 0.06. Temporal variability remained significantly associated with clinical state for 11/22 RAR features in mania and 16/22 features in depression, with all significant associations remaining after false discovery rate correction (p<0.05). Joint models showed modest incremental gains (AUC 3%-4% overall; up to 12% in mania, 7% in depression), with absolute performance remaining limited (AUC 0.50-0.66). In both mania and depression, nearly all significant variability-based regressors contributed incremental information beyond mean-based models. Only sleep duration and activity changes around wake time (+-1 hour), did not improve discrimination between mania and remission. Conclusions: Temporal variability in RAR features can be considered a standalone state marker of mood episodes not captured by mean activity. We found it to be more consistently associated with depression than mania. Its incremental discriminative contribution is modest, suggesting greater utility within multivariate or multimodal frameworks.

20
An ancestry-matched Mendelian randomisation analysis of kidney function and heart failure subtypes in African ancestry populations

Gaye, N. D.; Diawara, A.

2026-07-17 genetic and genomic medicine 10.64898/2026.07.15.26358145 medRxiv
Top 2%
0.0%
Show abstract

Chronic kidney disease and heart failure disproportionately burden populations of African ancestry, yet Mendelian randomisation (MR) studies of the causal relationship between kidney function and heart failure subtypes have been conducted exclusively in European ancestry populations. We performed a forward two-sample MR analysis to evaluate the causal effect of genetically predicted estimated glomerular filtration rate (eGFR) on heart failure with preserved ejection fraction (HFpEF) and heart failure with reduced ejection fraction (HFrEF) in individuals of African ancestry. Genetic instruments were selected from an African ancestry eGFR genome-wide association study (N = 67,943) at genome-wide significance, with linkage disequilibrium clumping using an African ancestry reference panel. Heart failure subtype summary statistics were obtained from the Million Veteran Program (HFpEF: 5,379 cases / 113,041 controls; HFrEF: 9,104 cases / 109,632 controls). Six independent SNPs (F-statistics 30.5 &#8211 107.3; R&#178 = 0.62%) were retained as instruments. The primary inverse-variance weighted analysis provided no evidence of a causal effect of eGFR on HFpEF (OR 0.92, 95% CI 0.80 &#8211 1.06, p = 0.248) or HFrEF (OR 0.98, 95% CI 0.78 &#8211 1.23, p = 0.878). Sensitivity analyses were directionally consistent. There was no evidence of heterogeneity or directional pleiotropy. Minimum detectable effects at 80% power were OR 1.28 for HFpEF and OR 1.22 for HFrEF. These null findings should be interpreted as inconclusive given current power constraints; larger ancestry-matched studies are needed.